Cancer-miRNA Regulatory Network

Compendium of miRNA Target Genes

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Genes Targeted by hsa-mir-548m in GLB Brain Sun Cluster 54 Table contains all genes in the GLB Brain Sun cluster number 54. If a gene harbors a predicted miRNA binding site by one of the three inference methods it is displayed in the final column: M = Weeder-miRvestigator predicted site, P = PITA predicted site and T = TargetScan predicted site. Entrez ID Symbol Description hsa-mir-548m 163049 ZNF791 zinc finger protein 791 [Source:HGNC Symbol;Acc:26895] zzz999 80071 CCDC15 coiled-coil domain containing 15 [Source:HGNC Symbol;Acc:25798] P T 92667 C20orf72 chromosome 20 open reading frame 72 [Source:HGNC Symbol;Acc:16205] zzz999 259266 ASPM asp (abnormal spindle) homolog, microcephaly associated (Drosophila) [Source:HGNC Symbol;Acc:19048] zzz999 57674 RNF213 ring finger protein 213 [Source:HGNC Symbol;Acc:14539] T 55119 PRPF38B PRP38 pre-mRNA processing factor 38 (yeast) domain containing B [Source:HGNC Symbol;Acc:25512] P T 163590 TOR1AIP2 torsin A interacting protein 2 [Source:HGNC Symbol;Acc:24055] T 51230 PHF20 PHD finger protein 20 [Source:HGNC Symbol;Acc:16098] P T 5989 RFX1 regulatory factor X, 1 (influences HLA class II expression) [Source:HGNC Symbol;Acc:9982] P T 4698 NDUFA5 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa [Source:HGNC Symbol;Acc:7688] zzz999 26053 AUTS2 autism susceptibility candidate 2 [Source:HGNC Symbol;Acc:14262] zzz999 3735 KARS lysyl-tRNA synthetase [Source:HGNC Symbol;Acc:6215] zzz999 28316 CDH20 cadherin 20, type 2 [Source:HGNC Symbol;Acc:1760] T 25909 AHCTF1 AT hook containing transcription factor 1 [Source:HGNC Symbol;Acc:24618] zzz999 10081 PDCD7 programmed cell death 7 [Source:HGNC Symbol;Acc:8767] zzz999 90268 FAM105B family with sequence similarity 105, member B [Source:HGNC Symbol;Acc:25118] T 23080 AVL9 AVL9 homolog (S. cerevisiase) [Source:HGNC Symbol;Acc:28994] zzz999 26054 SENP6 SUMO1/sentrin specific peptidase 6 [Source:HGNC Symbol;Acc:20944] T 23174 ZCCHC14 zinc finger, CCHC domain containing 14 [Source:HGNC Symbol;Acc:24134] zzz999 25796 PGLS 6-phosphogluconolactonase [Source:HGNC Symbol;Acc:8903] zzz999 27352 SGSM3 small G protein signaling modulator 3 [Source:HGNC Symbol;Acc:25228] zzz999 221960 C7orf28B chromosome 7 open reading frame 28B [Source:HGNC Symbol;Acc:21717] zzz999 9202 ZMYM4 zinc finger, MYM-type 4 [Source:HGNC Symbol;Acc:13055] zzz999 22829 NLGN4Y neuroligin 4, Y-linked [Source:HGNC Symbol;Acc:15529] zzz999 55769 ZNF83 zinc finger protein 83 [Source:HGNC Symbol;Acc:13158] zzz999 94039 ZNF101 zinc finger protein 101 [Source:HGNC Symbol;Acc:12881] zzz999 66005 CHID1 chitinase domain containing 1 [Source:HGNC Symbol;Acc:28474] zzz999 201595 STT3B STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae) [Source:HGNC Symbol;Acc:30611] zzz999 2201 FBN2 fibrillin 2 [Source:HGNC Symbol;Acc:3604] zzz999 149647 FAM71A family with sequence similarity 71, member A [Source:HGNC Symbol;Acc:26541] zzz999 51164 DCTN4 dynactin 4 (p62) [Source:HGNC Symbol;Acc:15518] zzz999 64417 C5orf28 chromosome 5 open reading frame 28 [Source:HGNC Symbol;Acc:26139] zzz999 83943 IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) [Source:HGNC Symbol;Acc:14598] zzz999 55153 SDAD1 SDA1 domain containing 1 [Source:HGNC Symbol;Acc:25537] T 55699 IARS2 isoleucyl-tRNA synthetase 2, mitochondrial [Source:HGNC Symbol;Acc:29685] zzz999 55748 CNDP2 CNDP dipeptidase 2 (metallopeptidase M20 family) [Source:HGNC Symbol;Acc:24437] zzz999 1611 DAP death-associated protein [Source:HGNC Symbol;Acc:2672] zzz999 10262 SF3B4 splicing factor 3b, subunit 4, 49kDa [Source:HGNC Symbol;Acc:10771] zzz999 126626 GABPB2 GA binding protein transcription factor, beta subunit 2 [Source:HGNC Symbol;Acc:28441] zzz999 51552 RAB14 RAB14, member RAS oncogene family [Source:HGNC Symbol;Acc:16524] P T 131076 CCDC58 coiled-coil domain containing 58 [Source:HGNC Symbol;Acc:31136] zzz999 2967 GTF2H3 general transcription factor IIH, polypeptide 3, 34kDa [Source:HGNC Symbol;Acc:4657] zzz999 4140 MARK3 MAP/microtubule affinity-regulating kinase 3 [Source:HGNC Symbol;Acc:6897] zzz999 5422 POLA1 polymerase (DNA directed), alpha 1, catalytic subunit [Source:HGNC Symbol;Acc:9173] zzz999 9411 ARHGAP29 Rho GTPase activating protein 29 [Source:HGNC Symbol;Acc:30207] zzz999 148789 B3GALNT2 beta-1,3-N-acetylgalactosaminyltransferase 2 [Source:HGNC Symbol;Acc:28596] zzz999 55576 STAB2 stabilin 2 [Source:HGNC Symbol;Acc:18629] zzz999 199953 TMEM201 transmembrane protein 201 [Source:HGNC Symbol;Acc:33719] zzz999 5782 PTPN12 protein tyrosine phosphatase, non-receptor type 12 [Source:HGNC Symbol;Acc:9645] P T 8204 NRIP1 nuclear receptor interacting protein 1 [Source:HGNC Symbol;Acc:8001] T 84910 TMEM87B transmembrane protein 87B [Source:HGNC Symbol;Acc:25913] zzz999 54811 ZNF562 zinc finger protein 562 [Source:HGNC Symbol;Acc:25950] zzz999 83666 PARP9 poly (ADP-ribose) polymerase family, member 9 [Source:HGNC Symbol;Acc:24118] zzz999 56034 PDGFC platelet derived growth factor C [Source:HGNC Symbol;Acc:8801] zzz999 3987 LIMS1 LIM and senescent cell antigen-like domains 1 [Source:HGNC Symbol;Acc:6616] zzz999 8175 SF3A2 splicing factor 3a, subunit 2, 66kDa [Source:HGNC Symbol;Acc:10766] zzz999 10186 LHFP lipoma HMGIC fusion partner [Source:HGNC Symbol;Acc:6586] T 167227 DCP2 DCP2 decapping enzyme homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:24452] P T 84872 ZC3H10 zinc finger CCCH-type containing 10 [Source:HGNC Symbol;Acc:25893] zzz999 23043 TNIK TRAF2 and NCK interacting kinase [Source:HGNC Symbol;Acc:30765] zzz999 57579 FAM135A family with sequence similarity 135, member A [Source:HGNC Symbol;Acc:21084] P T 55253 TYW1 tRNA-yW synthesizing protein 1 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:25598] zzz999 8660 IRS2 insulin receptor substrate 2 [Source:HGNC Symbol;Acc:6126] P T 7046 TGFBR1 transforming growth factor, beta receptor 1 [Source:HGNC Symbol;Acc:11772] P T 54952 TRNAU1AP tRNA selenocysteine 1 associated protein 1 [Source:HGNC Symbol;Acc:30813] zzz999 64778 FNDC3B fibronectin type III domain containing 3B [Source:HGNC Symbol;Acc:24670] zzz999 10056 FARSB phenylalanyl-tRNA synthetase, beta subunit [Source:HGNC Symbol;Acc:17800] zzz999 25820 ARIH1 ariadne homolog, ubiquitin-conjugating enzyme E2 binding protein, 1 (Drosophila) [Source:HGNC Symbol;Acc:689] zzz999 10379 IRF9 interferon regulatory factor 9 [Source:HGNC Symbol;Acc:6131] zzz999 9898 UBAP2L ubiquitin associated protein 2-like [Source:HGNC Symbol;Acc:29877] zzz999 127018 LYPLAL1 lysophospholipase-like 1 [Source:HGNC Symbol;Acc:20440] zzz999 7697 ZNF138 zinc finger protein 138 [Source:HGNC Symbol;Acc:12922] zzz999 57695 USP37 ubiquitin specific peptidase 37 [Source:HGNC Symbol;Acc:20063] zzz999 57708 MIER1 mesoderm induction early response 1 homolog (Xenopus laevis) [Source:HGNC Symbol;Acc:29657] zzz999 57506 MAVS mitochondrial antiviral signaling protein [Source:HGNC Symbol;Acc:29233] zzz999 23165 NUP205 nucleoporin 205kDa [Source:HGNC Symbol;Acc:18658] zzz999 171023 ASXL1 additional sex combs like 1 (Drosophila) [Source:HGNC Symbol;Acc:18318] zzz999 25782 RAB3GAP2 RAB3 GTPase activating protein subunit 2 (non-catalytic) [Source:HGNC Symbol;Acc:17168] zzz999 55705 IPO9 importin 9 [Source:HGNC Symbol;Acc:19425] T 58513 EPS15L1 epidermal growth factor receptor pathway substrate 15-like 1 [Source:HGNC Symbol;Acc:24634] zzz999 6197 RPS6KA3 ribosomal protein S6 kinase, 90kDa, polypeptide 3 [Source:HGNC Symbol;Acc:10432] P T 6046 BRD2 bromodomain containing 2 [Source:HGNC Symbol;Acc:1103] zzz999 57473 ZNF512B zinc finger protein 512B [Source:HGNC Symbol;Acc:29212] zzz999 10447 FAM3C family with sequence similarity 3, member C [Source:HGNC Symbol;Acc:18664] zzz999 11313 LYPLA2 lysophospholipase II [Source:HGNC Symbol;Acc:6738] zzz999 23332 CLASP1 cytoplasmic linker associated protein 1 [Source:HGNC Symbol;Acc:17088] T 4026 LPP LIM domain containing preferred translocation partner in lipoma [Source:HGNC Symbol;Acc:6679] zzz999 80267 EDEM3 ER degradation enhancer, mannosidase alpha-like 3 [Source:HGNC Symbol;Acc:16787] zzz999 81609 SNX27 sorting nexin family member 27 [Source:HGNC Symbol;Acc:20073] P T 1000 CDH2 cadherin 2, type 1, N-cadherin (neuronal) [Source:HGNC Symbol;Acc:1759] P T 10299 MARCH6 membrane-associated ring finger (C3HC4) 6 [Source:HGNC Symbol;Acc:30550] zzz999 26292 MYCBP c-myc binding protein [Source:HGNC Symbol;Acc:7554] zzz999 85441 zzz999 Peroxisomal proliferator-activated receptor A-interacting complex 285 kDa protein [Source:UniProtKB/Swiss-Prot;Acc:Q9BYK8] zzz999 55112 WDR60 WD repeat domain 60 [Source:HGNC Symbol;Acc:21862] zzz999 9563 H6PD hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase) [Source:HGNC Symbol;Acc:4795] zzz999 54778 RNF111 ring finger protein 111 [Source:HGNC Symbol;Acc:17384] T 79934 ADCK4 aarF domain containing kinase 4 [Source:HGNC Symbol;Acc:19041] zzz999 79823 CAMKMT calmodulin-lysine N-methyltransferase [Source:HGNC Symbol;Acc:26276] zzz999 374393 FAM111B family with sequence similarity 111, member B [Source:HGNC Symbol;Acc:24200] zzz999 51663 ZFR zinc finger RNA binding protein [Source:HGNC Symbol;Acc:17277] zzz999 79829 NAA40 N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:25845] T 388536 ZNF790 zinc finger protein 790 [Source:HGNC Symbol;Acc:33114] zzz999 1937 EEF1G eukaryotic translation elongation factor 1 gamma [Source:HGNC Symbol;Acc:3213] zzz999 54920 DUS2L dihydrouridine synthase 2-like, SMM1 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:26014] zzz999 5780 PTPN9 protein tyrosine phosphatase, non-receptor type 9 [Source:HGNC Symbol;Acc:9661] zzz999 23137 SMC5 structural maintenance of chromosomes 5 [Source:HGNC Symbol;Acc:20465] T 10657 KHDRBS1 KH domain containing, RNA binding, signal transduction associated 1 [Source:HGNC Symbol;Acc:18116] P T 54555 DDX49 DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Source:HGNC Symbol;Acc:18684] zzz999 23368 PPP1R13B protein phosphatase 1, regulatory (inhibitor) subunit 13B [Source:HGNC Symbol;Acc:14950] zzz999 56158 TEX12 testis expressed 12 [Source:HGNC Symbol;Acc:11734] zzz999 10552 ARPC1A actin related protein 2/3 complex, subunit 1A, 41kDa [Source:HGNC Symbol;Acc:703] zzz999 84881 RPUSD4 RNA pseudouridylate synthase domain containing 4 [Source:HGNC Symbol;Acc:25898] zzz999 10392 NOD1 nucleotide-binding oligomerization domain containing 1 [Source:HGNC Symbol;Acc:16390] zzz999 6261 RYR1 ryanodine receptor 1 (skeletal) [Source:HGNC Symbol;Acc:10483] zzz999 63826 SRR serine racemase [Source:HGNC Symbol;Acc:14398] zzz999 27316 RBMX RNA binding motif protein, X-linked [Source:HGNC Symbol;Acc:9910] zzz999 55616 ASAP3 ArfGAP with SH3 domain, ankyrin repeat and PH domain 3 [Source:HGNC Symbol;Acc:14987] zzz999 823 CAPN1 calpain 1, (mu/I) large subunit [Source:HGNC Symbol;Acc:1476] zzz999 192286 HIGD2A HIG1 hypoxia inducible domain family, member 2A [Source:HGNC Symbol;Acc:28311] zzz999 3910 LAMA4 laminin, alpha 4 [Source:HGNC Symbol;Acc:6484] T 54552 GNL3L guanine nucleotide binding protein-like 3 (nucleolar)-like [Source:HGNC Symbol;Acc:25553] T 57403 RAB22A RAB22A, member RAS oncogene family [Source:HGNC Symbol;Acc:9764] zzz999 5311 PKD2 polycystic kidney disease 2 (autosomal dominant) [Source:HGNC Symbol;Acc:9009] zzz999 3280 HES1 hairy and enhancer of split 1, (Drosophila) [Source:HGNC Symbol;Acc:5192] zzz999 54856 GON4L gon-4-like (C. elegans) [Source:HGNC Symbol;Acc:25973] zzz999 22890 ZBTB1 zinc finger and BTB domain containing 1 [Source:HGNC Symbol;Acc:20259] zzz999 93487 MAPK1IP1L mitogen-activated protein kinase 1 interacting protein 1-like [Source:HGNC Symbol;Acc:19840] T 3837 KPNB1 karyopherin (importin) beta 1 [Source:HGNC Symbol;Acc:6400] P T 10801 SEPT9 septin 9 [Source:HGNC Symbol;Acc:7323] zzz999 10480 EIF3M eukaryotic translation initiation factor 3, subunit M [Source:HGNC Symbol;Acc:24460] zzz999 7695 ZNF136 zinc finger protein 136 [Source:HGNC Symbol;Acc:12920] zzz999 1973 EIF4A1 eukaryotic translation initiation factor 4A1 [Source:HGNC Symbol;Acc:3282] zzz999 55257 C20orf20 chromosome 20 open reading frame 20 [Source:HGNC Symbol;Acc:15866] zzz999 51061 TXNDC11 thioredoxin domain containing 11 [Source:HGNC Symbol;Acc:28030] zzz999 6157 RPL27A ribosomal protein L27a [Source:HGNC Symbol;Acc:10329] T 2782 GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 [Source:HGNC Symbol;Acc:4396] zzz999 23683 PRKD3 protein kinase D3 [Source:HGNC Symbol;Acc:9408] T 54469 ZFAND6 zinc finger, AN1-type domain 6 [Source:HGNC Symbol;Acc:30164] zzz999 9931 HELZ helicase with zinc finger [Source:HGNC Symbol;Acc:16878] P T 9580 SOX13 SRY (sex determining region Y)-box 13 [Source:HGNC Symbol;Acc:11192] zzz999 130535 KCTD18 potassium channel tetramerisation domain containing 18 [Source:HGNC Symbol;Acc:26446] zzz999

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